Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase family protein | CD58_RS25215 | Not Available | Negative | 5874632 - 5875900 | 45524.6 |
| contact-dependent growth inhibition system immunity protein | CD58_RS25220 | Not Available | Negative | 5876196 - 5876501 | 12100.8 |
| rhs repeat protein | CD58_RS25225 | Not Available | Negative | 5876498 - 5881285 | 179926.0 |
| gnat family n-acetyltransferase | CD58_RS25230 | Not Available | Negative | 5881422 - 5881880 | 17574.9 |
| cdp-alcohol phosphatidyltransferase family protein | CD58_RS25235 | Not Available | Positive | 5882159 - 5882782 | 22280.7 |
| bifunctional alpha/beta hydrolase/class i sam-dependent methyltransferase | CD58_RS25240 | Not Available | Positive | 5882793 - 5884550 | 64936.5 |
| phosphatase pap2/dual specificity phosphatase family protein | CD58_RS25245 | Not Available | Positive | 5884550 - 5885893 | 49982.3 |
| hypothetical protein | CD58_RS25250 | Not Available | Positive | 5885883 - 5886338 | 16681.6 |
| lysophospholipid acyltransferase family protein | CD58_RS25255 | Not Available | Positive | 5886348 - 5886968 | 22965.0 |
| metal abc transporter atp-binding protein | CD58_RS25260 | Not Available | Positive | 5886970 - 5887901 | 33035.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
