Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS25160 | Not Available | Negative | 5862671 - 5862853 | 6419.84 |
| duf6124 family protein | CD58_RS25165 | Not Available | Negative | 5863193 - 5863552 | 13027.5 |
| glycoside hydrolase family 68 protein | CD58_RS25170 | Not Available | Negative | 5864150 - 5865424 | 46983.9 |
| duf6124 family protein | CD58_RS25175 | Not Available | Negative | 5865951 - 5866304 | 12811.3 |
| aldehyde dehydrogenase family protein | CD58_RS25180 | Not Available | Negative | 5866652 - 5868064 | 49933.1 |
| homoserine dehydrogenase | CD58_RS25185 | Not Available | Negative | 5868069 - 5869118 | 36550.4 |
| lrp/asnc family transcriptional regulator | CD58_RS25195 | Not Available | Negative | 5870256 - 5870693 | 16170.6 |
| threonine synthase | CD58_RS25200 | Not Available | Negative | 5870703 - 5872082 | 50897.7 |
| lysr substrate-binding domain-containing protein | CD58_RS25205 | Not Available | Negative | 5872099 - 5872989 | 33255.1 |
| amino acid permease | CD58_RS25210 | Not Available | Negative | 5873047 - 5874477 | 51666.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
