Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic diphosphatase | CD58_RS25115 | Not Available | Positive | 5850042 - 5850569 | 19232.0 |
| helix-turn-helix transcriptional regulator | CD58_RS25120 | Not Available | Positive | 5850766 - 5851497 | 27251.4 |
| type i restriction-modification system subunit m | CD58_RS25125 | Not Available | Negative | 5851913 - 5853535 | 60973.9 |
| aaa family atpase | CD58_RS25130 | Not Available | Negative | 5853532 - 5854731 | 44716.9 |
| restriction endonuclease subunit s | CD58_RS25135 | Not Available | Negative | 5854728 - 5856029 | 48516.2 |
| type i restriction endonuclease subunit r | CD58_RS25140 | Not Available | Negative | 5856019 - 5859030 | 114724.0 |
| metal abc transporter atp-binding protein | CD58_RS29600 | Not Available | Positive | 5859115 - 5859475 | 13590.9 |
| macro domain-containing protein | CD58_RS25145 | Not Available | Positive | 5859472 - 5860560 | 40619.9 |
| n-6 dna methylase | CD58_RS29605 | Not Available | Negative | 5860711 - 5862078 | 50932.3 |
| restriction endonuclease subunit s | CD58_RS31305 | Not Available | Negative | 5862075 - 5862671 | 22084.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
