Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin prenyltransferase ubix | CD58_RS25065 | Not Available | Negative | 5836489 - 5837136 | 23388.3 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | CD58_RS25070 | Not Available | Negative | 5837133 - 5838482 | 48350.1 |
| sigma-54-dependent fis family transcriptional regulator | CD58_RS25075 | Not Available | Negative | 5838844 - 5840751 | 70223.4 |
| aldehyde dehydrogenase family protein | CD58_RS25080 | Not Available | Positive | 5841240 - 5842760 | 54859.9 |
| ethanolamine permease | CD58_RS25085 | Not Available | Positive | 5843021 - 5844391 | 48824.0 |
| ethanolamine ammonia-lyase subunit eutb | CD58_RS25090 | Not Available | Positive | 5844595 - 5845989 | 50010.9 |
| ethanolamine ammonia-lyase subunit eutc | CD58_RS25095 | Not Available | Positive | 5846001 - 5846825 | 30139.0 |
| gnat family n-acetyltransferase | CD58_RS25100 | Not Available | Positive | 5846932 - 5847393 | 17780.3 |
| deda family protein | CD58_RS25105 | Not Available | Positive | 5848464 - 5849111 | 23611.6 |
| zinc-dependent peptidase | CD58_RS25110 | Not Available | Positive | 5849118 - 5849930 | 31102.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
