Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | CD58_RS25015 | Not Available | Negative | 5827318 - 5828589 | 45074.3 |
| dna-3-methyladenine glycosylase | CD58_RS25020 | Not Available | Positive | 5828776 - 5829453 | 25030.0 |
| bifunctional deda family/phosphatase pap2 family protein | CD58_RS25025 | Not Available | Positive | 5829654 - 5830970 | 47387.4 |
| lon peptidase substrate-binding domain-containing protein | CD58_RS25030 | Not Available | Negative | 5831125 - 5831715 | 21597.9 |
| lrgb family protein | CD58_RS25035 | Not Available | Negative | 5831726 - 5832442 | 24958.6 |
| cida/lrga family protein | CD58_RS25040 | Not Available | Negative | 5832439 - 5832804 | 13077.8 |
| maoc family dehydratase | CD58_RS25045 | Not Available | Positive | 5832994 - 5833449 | 16706.4 |
| c13 family peptidase | CD58_RS25050 | Not Available | Positive | 5833552 - 5835270 | 62455.9 |
| oxidoreductase | CD58_RS25055 | Not Available | Positive | 5835298 - 5835939 | 23360.5 |
| ycek/yidq family lipoprotein | CD58_RS25060 | Not Available | Negative | 5836212 - 5836496 | 9501.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
