Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | CD58_RS24965 | Not Available | Negative | 5818181 - 5818828 | 23532.4 |
| duf493 domain-containing protein | CD58_RS24970 | Not Available | Negative | 5818828 - 5819103 | 10129.2 |
| d-alanyl-d-alanine carboxypeptidase family protein | CD58_RS24975 | Not Available | Negative | 5819185 - 5820342 | 42104.8 |
| septal ring lytic transglycosylase rlpa family protein | CD58_RS24980 | Not Available | Negative | 5820511 - 5821521 | 36214.1 |
| lytic murein transglycosylase b | CD58_RS24985 | Not Available | Negative | 5821521 - 5822531 | 37656.7 |
| rod shape-determining protein roda | CD58_RS24990 | Not Available | Negative | 5822549 - 5823652 | 40107.8 |
| penicillin-binding protein 2 | CD58_RS24995 | Not Available | Negative | 5823684 - 5825579 | 70528.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CD58_RS25000 | Not Available | Negative | 5825590 - 5826057 | 17707.5 |
| ribosome silencing factor | CD58_RS25005 | Not Available | Negative | 5826067 - 5826561 | 18040.4 |
| nicotinate-nucleotide adenylyltransferase | CD58_RS25010 | Not Available | Negative | 5826633 - 5827316 | 24610.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
