Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS24925 | Not Available | Negative | 5807350 - 5807670 | 11967.4 |
| leucine--trna ligase | CD58_RS24930 | Not Available | Positive | 5807976 - 5810582 | 96987.4 |
| lps assembly lipoprotein lpte | CD58_RS24935 | Not Available | Positive | 5810671 - 5811276 | 22429.7 |
| dna polymerase iii subunit delta | CD58_RS24940 | Not Available | Positive | 5811316 - 5812353 | 37374.2 |
| alternative ribosome rescue factor arfa | CD58_RS24945 | Not Available | Positive | 5812603 - 5812767 | 6122.25 |
| lytic murein transglycosylase | CD58_RS24950 | Not Available | Positive | 5812840 - 5814162 | 47948.0 |
| metal abc transporter atp-binding protein | CD58_RS24955 | Not Available | Negative | 5814293 - 5815224 | 34014.4 |
| hypothetical protein | CD58_RS31625 | Not Available | Positive | 5815377 - 5815502 | 4438.41 |
| hypothetical protein | CD58_RS30930 | Not Available | Positive | 5815475 - 5815774 | 10659.7 |
| lipoyl synthase | CD58_RS24960 | Not Available | Negative | 5817157 - 5818155 | 37311.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
