Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | CD58_RS24875 | Not Available | Positive | 5797484 - 5798110 | 22174.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | CD58_RS24880 | Not Available | Positive | 5798138 - 5799421 | 45123.4 |
| tetratricopeptide repeat protein | CD58_RS24885 | Not Available | Positive | 5799639 - 5800193 | 19771.6 |
| duf1820 family protein | CD58_RS24890 | Not Available | Negative | 5800443 - 5800772 | 12570.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | CD58_RS24895 | Not Available | Positive | 5800906 - 5802234 | 49412.9 |
| phoh family protein | CD58_RS24900 | Not Available | Positive | 5802450 - 5803460 | 37994.8 |
| rrna maturation rnase ybey | CD58_RS24905 | Not Available | Positive | 5803453 - 5803911 | 17237.1 |
| hlyc/corc family transporter | CD58_RS24910 | Not Available | Positive | 5803952 - 5804791 | 31406.4 |
| apolipoprotein n-acyltransferase | CD58_RS24915 | Not Available | Positive | 5804819 - 5806342 | 55780.5 |
| ydcf family protein | CD58_RS24920 | Not Available | Negative | 5806485 - 5807246 | 28287.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
