Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS24825 | Not Available | Positive | 5785648 - 5786067 | 14709.0 |
| cation diffusion facilitator family transporter | CD58_RS24830 | Not Available | Positive | 5786096 - 5786989 | 31763.6 |
| duf6515 family protein | CD58_RS24835 | Not Available | Negative | 5787125 - 5788138 | 37979.4 |
| lrp/asnc family transcriptional regulator | CD58_RS24840 | Not Available | Positive | 5788554 - 5789033 | 18068.9 |
| duf2788 domain-containing protein | CD58_RS24845 | Not Available | Positive | 5789516 - 5789725 | 7543.66 |
| pseudouridine synthase | CD58_RS24850 | Not Available | Negative | 5789720 - 5790286 | 21308.7 |
| amp nucleosidase | CD58_RS24855 | Not Available | Negative | 5790425 - 5791924 | 55967.2 |
| acyl-coa dehydrogenase family protein | CD58_RS24860 | Not Available | Negative | 5792103 - 5793752 | 59825.4 |
| hybrid sensor histidine kinase/response regulator | CD58_RS24865 | Not Available | Negative | 5793825 - 5796209 | 87311.1 |
| metal abc transporter atp-binding protein | CD58_RS24870 | Not Available | Positive | 5796670 - 5797466 | 28434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
