Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03862 family flavoprotein | CD58_RS24775 | Not Available | Positive | 5774176 - 5775417 | 43920.4 |
| dead/deah box helicase | CD58_RS24780 | Not Available | Negative | 5775837 - 5777174 | 48738.5 |
| drug/metabolite exporter yeda | CD58_RS24785 | Not Available | Negative | 5777233 - 5778135 | 31473.4 |
| lrp/asnc family transcriptional regulator | CD58_RS24790 | Not Available | Positive | 5778297 - 5778749 | 16390.1 |
| polc-type dna polymerase iii | CD58_RS24795 | Not Available | Negative | 5778878 - 5779489 | 22443.3 |
| nyn domain-containing protein | CD58_RS24800 | Not Available | Negative | 5779512 - 5779991 | 17599.1 |
| duf2076 domain-containing protein | CD58_RS24805 | Not Available | Negative | 5780130 - 5780897 | 26567.1 |
| ycic family protein | CD58_RS24810 | Not Available | Positive | 5781072 - 5781734 | 24637.2 |
| endonuclease/exonuclease/phosphatase family protein | CD58_RS24815 | Not Available | Positive | 5781824 - 5782903 | 40357.3 |
| atp-dependent helicase hrpb | CD58_RS24820 | Not Available | Negative | 5783036 - 5785552 | 92541.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
