Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroshikimate dehydratase quic | CD58_RS24730 | Not Available | Negative | 5763970 - 5765871 | 70008.0 |
| hypothetical protein | CD58_RS31150 | Not Available | Negative | 5765995 - 5766150 | 5941.44 |
| mfs transporter | CD58_RS24735 | Not Available | Positive | 5766178 - 5767491 | 48036.7 |
| dmt family transporter | CD58_RS24740 | Not Available | Negative | 5767660 - 5768538 | 31823.2 |
| neutral zinc metallopeptidase | CD58_RS24745 | Not Available | Positive | 5768791 - 5769675 | 31748.4 |
| hypothetical protein | CD58_RS24750 | Not Available | Positive | 5769676 - 5770623 | 34769.5 |
| had family hydrolase | CD58_RS24755 | Not Available | Negative | 5770767 - 5771360 | 21354.7 |
| acyl-coa thioesterase ii | CD58_RS24760 | Not Available | Negative | 5771357 - 5772226 | 32510.5 |
| gnat family n-acetyltransferase | CD58_RS24765 | Not Available | Negative | 5772331 - 5772900 | 21357.6 |
| histone deacetylase | CD58_RS24770 | Not Available | Positive | 5772974 - 5773894 | 33967.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
