Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large-conductance mechanosensitive channel protein mscl | CD58_RS24635 | Not Available | Positive | 5745335 - 5745748 | 14428.0 |
| ferredoxin--nadp reductase | CD58_RS24640 | Not Available | Negative | 5745791 - 5746567 | 29666.5 |
| autoinducer binding domain-containing protein | CD58_RS24645 | Not Available | Positive | 5746861 - 5747574 | 27084.2 |
| methyltransferase | CD58_RS24650 | Not Available | Positive | 5747755 - 5748879 | 40393.8 |
| duf2474 domain-containing protein | CD58_RS29585 | Not Available | Negative | 5748951 - 5749115 | 6100.67 |
| cytochrome d ubiquinol oxidase subunit ii | CD58_RS24655 | Not Available | Negative | 5749137 - 5750144 | 37245.5 |
| cytochrome ubiquinol oxidase subunit i | CD58_RS24660 | Not Available | Negative | 5750148 - 5751584 | 53236.1 |
| mfs transporter | CD58_RS24665 | Not Available | Positive | 5752081 - 5753319 | 44034.9 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | CD58_RS24670 | Not Available | Negative | 5753316 - 5755517 | 78888.7 |
| fad binding domain-containing protein | CD58_RS24675 | Not Available | Negative | 5755517 - 5756518 | 35824.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
