Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS24585 | Not Available | Positive | 5730703 - 5734551 | 145286.0 |
| serine hydroxymethyltransferase | CD58_RS24590 | Not Available | Positive | 5734782 - 5736035 | 44825.6 |
| hypothetical protein | CD58_RS24595 | Not Available | Positive | 5736262 - 5736801 | 19984.1 |
| gtpase | CD58_RS24600 | Not Available | Negative | 5736930 - 5737898 | 35409.9 |
| ybdd/yjix family protein | CD58_RS24605 | Not Available | Negative | 5738458 - 5738655 | 7533.07 |
| carbon starvation csta family protein | CD58_RS24610 | Not Available | Negative | 5738671 - 5740737 | 73843.4 |
| pilz domain-containing protein | CD58_RS24615 | Not Available | Positive | 5740896 - 5741252 | 13746.6 |
| dna repair protein rada | CD58_RS24620 | Not Available | Negative | 5741483 - 5742850 | 48775.3 |
| ankyrin repeat domain-containing protein | CD58_RS24625 | Not Available | Negative | 5742894 - 5743442 | 19451.2 |
| catalase katb | CD58_RS24630 | Not Available | Negative | 5743510 - 5745051 | 56725.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
