Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malic enzyme-like nad(p)-binding protein | CD58_RS01970 | Not Available | Positive | 456924 - 458192 | 45202.6 |
| hypothetical protein | CD58_RS29815 | Not Available | Negative | 458607 - 458918 | 11455.4 |
| penicillin-binding protein 1a | CD58_RS01975 | Not Available | Negative | 459201 - 461648 | 89193.3 |
| pilus assembly protein pilm | CD58_RS01980 | Not Available | Positive | 461854 - 462918 | 38148.9 |
| piln domain-containing protein | CD58_RS01985 | Not Available | Positive | 462918 - 463484 | 21353.7 |
| type 4a pilus biogenesis protein pilo | CD58_RS01990 | Not Available | Positive | 463481 - 464104 | 23163.8 |
| pilus assembly protein pilp | CD58_RS01995 | Not Available | Positive | 464101 - 464646 | 20120.0 |
| type iv pilus secretin pilq | CD58_RS02000 | Not Available | Positive | 464643 - 466718 | 74744.1 |
| shikimate kinase arok | CD58_RS02005 | Not Available | Positive | 466723 - 467241 | 19315.6 |
| 3-dehydroquinate synthase | CD58_RS02010 | Not Available | Positive | 467423 - 468523 | 39748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
