Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | CD58_RS17585 | Not Available | Negative | 4181300 - 4182181 | 31111.3 |
| Bacteriophage tail protein gpt | CD58_RS17590 | Not Available | Negative | 4182181 - 4184703 | 88280.3 |
| hypothetical protein | CD58_RS17595 | Not Available | Positive | 4184725 - 4184985 | 9072.48 |
| Gp41 | CD58_RS17600 | Not Available | Negative | 4185045 - 4185359 | 11013.2 |
| hypothetical protein | CD58_RS17605 | Not Available | Positive | 4185516 - 4185707 | 6923.11 |
| duf6124 family protein | CD58_RS17610 | Not Available | Negative | 4185770 - 4186132 | 13194.9 |
| slatt domain-containing protein | CD58_RS28790 | Not Available | Negative | 4187288 - 4187785 | 18437.1 |
| Hypothetical protein | CD58_RS17620 | Not Available | Negative | 4187841 - 4188884 | 39947.3 |
| smek domain-containing protein | CD58_RS28795 | Not Available | Negative | 4188937 - 4189878 | 35245.6 |
| hypothetical protein | CD58_RS17630 | Not Available | Negative | 4190022 - 4190390 | 13917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
