Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS24535 | Not Available | Positive | 5719879 - 5720136 | 9860.72 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CD58_RS24540 | Not Available | Negative | 5720263 - 5720880 | 21819.7 |
| tigr00645 family protein | CD58_RS24545 | Not Available | Negative | 5721085 - 5721573 | 18295.9 |
| hypothetical protein | CD58_RS24550 | Not Available | Negative | 5721705 - 5722046 | 12339.9 |
| lon protease family protein | CD58_RS24555 | Not Available | Negative | 5722371 - 5724809 | 88895.8 |
| duf3015 domain-containing protein | CD58_RS24560 | Not Available | Positive | 5725083 - 5725571 | 17037.1 |
| duf4105 domain-containing protein | CD58_RS24565 | Not Available | Positive | 5725661 - 5727514 | 70066.8 |
| hypothetical protein | CD58_RS24570 | Not Available | Positive | 5727631 - 5727987 | 13526.6 |
| grea/greb family elongation factor | CD58_RS24575 | Not Available | Positive | 5728058 - 5728549 | 18015.1 |
| energy-dependent translational throttle protein etta | CD58_RS24580 | Not Available | Negative | 5728767 - 5730431 | 61624.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
