Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fad synthetase | CD58_RS24485 | Not Available | Negative | 5710781 - 5711719 | 34355.5 |
| murein biosynthesis integral membrane protein murj | CD58_RS24490 | Not Available | Negative | 5711849 - 5713387 | 55962.7 |
| 30s ribosomal protein s20 | CD58_RS24495 | Not Available | Positive | 5713642 - 5713920 | 10041.3 |
| crea family protein | CD58_RS24500 | Not Available | Negative | 5714100 - 5714564 | 16680.4 |
| glutamate 5-kinase | CD58_RS24505 | Not Available | Negative | 5714574 - 5715692 | 39676.1 |
| obg family gtpase cgta | CD58_RS24510 | Not Available | Negative | 5715975 - 5717198 | 44761.6 |
| 50s ribosomal protein l27 | CD58_RS24515 | Not Available | Negative | 5717389 - 5717646 | 9220.31 |
| 50s ribosomal protein l21 | CD58_RS24520 | Not Available | Negative | 5717682 - 5717996 | 11618.3 |
| polyprenyl synthetase family protein | CD58_RS24525 | Not Available | Positive | 5718236 - 5719204 | 34897.0 |
| zinc ribbon domain-containing protein yjdm | CD58_RS24530 | Not Available | Positive | 5719334 - 5719675 | 12246.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
