Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | CD58_RS24435 | Not Available | Negative | 5699864 - 5702977 | 109757.0 |
| pilx n-terminal domain-containing pilus assembly protein | CD58_RS24440 | Not Available | Negative | 5702964 - 5703443 | 16684.2 |
| pilw family protein | CD58_RS24445 | Not Available | Negative | 5703454 - 5704167 | 25098.4 |
| type iv pilus modification protein pilv | CD58_RS24450 | Not Available | Negative | 5704164 - 5704625 | 16477.6 |
| gsph/fimt family pseudopilin | CD58_RS24455 | Not Available | Negative | 5704622 - 5705095 | 16376.0 |
| gsph/fimt family protein | CD58_RS24460 | Not Available | Positive | 5705357 - 5705872 | 18799.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CD58_RS24465 | Not Available | Negative | 5705849 - 5706796 | 34588.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CD58_RS24470 | Not Available | Negative | 5706989 - 5707426 | 15811.8 |
| signal peptidase ii | CD58_RS24475 | Not Available | Negative | 5707419 - 5707943 | 19437.7 |
| isoleucine--trna ligase | CD58_RS24480 | Not Available | Negative | 5707936 - 5710767 | 105626.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
