Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1780 domain-containing protein | CD58_RS24340 | Not Available | Positive | 5682024 - 5682650 | 24116.8 |
| mosc domain-containing protein | CD58_RS24345 | Not Available | Positive | 5682647 - 5683174 | 19112.3 |
| duf3094 domain-containing protein | CD58_RS24350 | Not Available | Positive | 5683227 - 5683400 | 6703.36 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS24355 | Not Available | Positive | 5683461 - 5684759 | 47144.0 |
| methyl-accepting chemotaxis protein | CD58_RS24360 | Not Available | Negative | 5684939 - 5686564 | 58315.4 |
| Trna-pro | Not Available | Not Available | Positive | 5686718 - 5686794 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 5686888 - 5686963 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 5686969 - 5687045 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 5687053 - 5687128 | Not Available |
| atp-dependent chaperone clpb | CD58_RS24385 | Not Available | Negative | 5687543 - 5690107 | 95446.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
