Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2845 domain-containing protein | CD58_RS24290 | Not Available | Positive | 5674223 - 5674519 | 11016.2 |
| bon domain-containing protein | CD58_RS24295 | Not Available | Negative | 5674857 - 5675210 | 12061.6 |
| pilin | CD58_RS24300 | Not Available | Negative | 5675522 - 5675950 | 14051.9 |
| type iv-a pilus assembly atpase pilb | CD58_RS24305 | Not Available | Positive | 5676176 - 5677876 | 62754.6 |
| type ii secretion system f family protein | CD58_RS24310 | Not Available | Positive | 5677879 - 5679096 | 44219.4 |
| prepilin peptidase | CD58_RS24315 | Not Available | Positive | 5679098 - 5679967 | 31955.0 |
| dephospho-coa kinase | CD58_RS24320 | Not Available | Positive | 5679980 - 5680603 | 23053.5 |
| dna gyrase inhibitor yacg | CD58_RS24325 | Not Available | Positive | 5680600 - 5680806 | 7689.81 |
| hypothetical protein | CD58_RS24330 | Not Available | Negative | 5680827 - 5681042 | 8119.5 |
| energy-coupling factor abc transporter permease | CD58_RS24335 | Not Available | Negative | 5681106 - 5681792 | 25525.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
