Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polynucleotide adenylyltransferase pcnb | CD58_RS24245 | Not Available | Positive | 5661362 - 5662759 | 53359.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CD58_RS24250 | Not Available | Positive | 5662763 - 5663248 | 17801.6 |
| metal abc transporter atp-binding protein | CD58_RS31555 | Not Available | Positive | 5663264 - 5663353 | 3024.65 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CD58_RS24255 | Not Available | Positive | 5663613 - 5664413 | 28008.4 |
| pantoate--beta-alanine ligase | CD58_RS24260 | Not Available | Positive | 5664410 - 5665270 | 31179.8 |
| aspartate 1-decarboxylase | CD58_RS24265 | Not Available | Positive | 5665301 - 5665681 | 14054.8 |
| glucose-6-phosphate isomerase | CD58_RS24270 | Not Available | Positive | 5666045 - 5667709 | 61397.1 |
| acetate--coa ligase | CD58_RS24275 | Not Available | Positive | 5667901 - 5669838 | 71877.5 |
| class i sam-dependent rrna methyltransferase | CD58_RS24280 | Not Available | Positive | 5670152 - 5671168 | 37623.9 |
| duf748 domain-containing protein | CD58_RS24285 | Not Available | Positive | 5671288 - 5674221 | 106894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
