Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feccd family abc transporter permease | CD58_RS24195 | Not Available | Negative | 5649697 - 5650680 | 33295.9 |
| hemin abc transporter substrate-binding protein | CD58_RS24200 | Not Available | Negative | 5650731 - 5651609 | 30725.0 |
| rieske (2fe-2s) protein | CD58_RS24205 | Not Available | Positive | 5651873 - 5652190 | 11477.7 |
| dna/rna nuclease sfsa | CD58_RS24210 | Not Available | Negative | 5652146 - 5652901 | 27619.2 |
| pyridoxal phosphate-dependent aminotransferase | CD58_RS24215 | Not Available | Negative | 5652901 - 5654073 | 42715.9 |
| rna polymerase-binding protein dksa | CD58_RS24220 | Not Available | Positive | 5654424 - 5654867 | 16995.2 |
| trna glutamyl-q(34) synthetase gluqrs | CD58_RS24225 | Not Available | Positive | 5655098 - 5655988 | 33101.6 |
| hypothetical protein | CD58_RS30885 | Not Available | Positive | 5656069 - 5656245 | 6923.69 |
| sensor histidine kinase | CD58_RS24235 | Not Available | Positive | 5656229 - 5659183 | 108141.0 |
| sigma-54-dependent transcriptional regulator | CD58_RS24240 | Not Available | Positive | 5659206 - 5660636 | 52172.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
