Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 large subunit | CD58_RS24145 | Not Available | Negative | 5638853 - 5640577 | 62619.0 |
| duf4124 domain-containing protein | CD58_RS24150 | Not Available | Positive | 5640984 - 5641400 | 15331.3 |
| yqcc family protein | CD58_RS24155 | Not Available | Negative | 5641407 - 5641736 | 12357.9 |
| tetratricopeptide repeat protein | CD58_RS24160 | Not Available | Negative | 5641736 - 5642455 | 24504.0 |
| penicillin-binding protein 1b | CD58_RS24165 | Not Available | Negative | 5642472 - 5644790 | 85136.1 |
| aaa family atpase | CD58_RS24170 | Not Available | Positive | 5644908 - 5646464 | 57390.5 |
| pentapeptide repeat-containing protein | CD58_RS24175 | Not Available | Positive | 5646559 - 5646900 | 12705.0 |
| tfox/sxy family protein | CD58_RS24180 | Not Available | Positive | 5647135 - 5647407 | 10117.1 |
| metal abc transporter atp-binding protein | CD58_RS24185 | Not Available | Negative | 5648061 - 5648908 | 31009.5 |
| heme abc transporter atp-binding protein | CD58_RS24190 | Not Available | Negative | 5648930 - 5649697 | 27832.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
