Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 5628799 - 5628914 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 5629082 - 5631973 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 5632220 - 5632295 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5632306 - 5632382 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5632506 - 5634042 | Not Available |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | CD58_RS24120 | Not Available | Negative | 5634597 - 5635217 | 23146.4 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | CD58_RS24125 | Not Available | Negative | 5635217 - 5636230 | 37922.2 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | CD58_RS24130 | Not Available | Negative | 5636306 - 5637151 | 30105.7 |
| ketol-acid reductoisomerase | CD58_RS24135 | Not Available | Negative | 5637296 - 5638312 | 36211.4 |
| acetolactate synthase small subunit | CD58_RS24140 | Not Available | Negative | 5638359 - 5638850 | 17831.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
