Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(3-hydroxyalkanoate) depolymerase | CD58_RS01920 | Not Available | Negative | 444650 - 445507 | 31497.7 |
| class ii poly(r)-hydroxyalkanoic acid synthase | CD58_RS01925 | Not Available | Negative | 445768 - 447447 | 62367.3 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | CD58_RS01930 | Not Available | Negative | 447724 - 448101 | 14043.8 |
| atp-dependent protease atpase subunit hslu | CD58_RS01935 | Not Available | Negative | 448299 - 449636 | 49816.1 |
| atp-dependent protease subunit hslv | CD58_RS01940 | Not Available | Negative | 449691 - 450215 | 18539.2 |
| spor domain-containing protein | CD58_RS01945 | Not Available | Negative | 450484 - 451179 | 25082.4 |
| arginine--trna ligase | CD58_RS01950 | Not Available | Negative | 451181 - 452917 | 63744.5 |
| primosomal protein n' | CD58_RS01955 | Not Available | Negative | 453181 - 455400 | 81893.3 |
| 50s ribosomal protein l31 | CD58_RS01960 | Not Available | Positive | 455691 - 455915 | 8118.64 |
| thermonuclease family protein | CD58_RS01965 | Not Available | Positive | 455927 - 456742 | 29420.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
