Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonate dehydratase | CD58_RS24045 | Not Available | Negative | 5617343 - 5617987 | 24231.0 |
| hypothetical protein | CD58_RS24050 | Not Available | Positive | 5618120 - 5618524 | 14892.5 |
| ribosomal protein s18-alanine n-acetyltransferase | CD58_RS24055 | Not Available | Negative | 5618663 - 5619115 | 17145.6 |
| energy transducer tonb | CD58_RS24060 | Not Available | Negative | 5619108 - 5619887 | 28730.8 |
| mks condensin complex protein mksb | CD58_RS24065 | Not Available | Positive | 5620069 - 5621349 | 49079.1 |
| mks condensin complex protein mkse | CD58_RS24070 | Not Available | Positive | 5621339 - 5622040 | 26528.3 |
| mks condensin complex protein mksf | CD58_RS24075 | Not Available | Positive | 5622037 - 5624877 | 106656.0 |
| pqib family protein | CD58_RS24080 | Not Available | Negative | 5625084 - 5627387 | 83077.2 |
| paraquat-inducible protein a | CD58_RS24085 | Not Available | Negative | 5627380 - 5628003 | 22689.3 |
| paraquat-inducible protein a | CD58_RS24090 | Not Available | Negative | 5627990 - 5628649 | 24243.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
