Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CD58_RS23990 | Not Available | Negative | 5603673 - 5605835 | 76476.8 |
| mfs transporter | CD58_RS24000 | Not Available | Negative | 5606342 - 5607559 | 43393.0 |
| methyl-accepting chemotaxis protein | CD58_RS24005 | Not Available | Positive | 5607891 - 5609948 | 73265.0 |
| Trna-met | Not Available | Not Available | Positive | 5610052 - 5610128 | Not Available |
| gamma-glutamyltransferase | CD58_RS24015 | Not Available | Positive | 5610311 - 5612152 | 63943.7 |
| metal abc transporter atp-binding protein | CD58_RS29565 | Not Available | Negative | 5612134 - 5612367 | 8109.05 |
| methyl-accepting chemotaxis protein | CD58_RS31705 | Not Available | Negative | 5612402 - 5613718 | 48444.2 |
| short-chain fatty acid transporter | CD58_RS24030 | Not Available | Positive | 5613933 - 5615351 | 50573.5 |
| hypothetical protein | CD58_RS24035 | Not Available | Positive | 5615464 - 5616624 | 42004.9 |
| lysine methyltransferase | CD58_RS24040 | Not Available | Positive | 5616805 - 5617317 | 19678.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
