Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS23940 | Not Available | Negative | 5591296 - 5591883 | 19587.8 |
| duf3592 domain-containing protein | CD58_RS23945 | Not Available | Negative | 5591887 - 5592330 | 15528.9 |
| abc transporter substrate-binding protein | CD58_RS23950 | Not Available | Positive | 5592812 - 5593825 | 37347.9 |
| feccd family abc transporter permease | CD58_RS23955 | Not Available | Positive | 5593822 - 5594838 | 34598.4 |
| abc transporter atp-binding protein | CD58_RS23960 | Not Available | Positive | 5594835 - 5595626 | 28830.9 |
| osmc domain/ycao domain-containing protein | CD58_RS23965 | Not Available | Negative | 5595676 - 5597901 | 82819.9 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | CD58_RS23970 | Not Available | Negative | 5598081 - 5600369 | 85749.8 |
| sensor histidine kinase | CD58_RS23975 | Not Available | Negative | 5600521 - 5601552 | 36983.0 |
| atpase domain-containing protein | CD58_RS23980 | Not Available | Negative | 5601562 - 5603022 | 53196.3 |
| hypothetical protein | CD58_RS23985 | Not Available | Negative | 5603019 - 5603453 | 15491.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
