Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CD58_RS23895 | Not Available | Positive | 5580704 - 5581555 | 30543.1 |
| Trna-gln | Not Available | Not Available | Positive | 5581593 - 5581667 | Not Available |
| ribose-phosphate pyrophosphokinase | CD58_RS23905 | Not Available | Positive | 5581715 - 5582656 | 34146.3 |
| 50s ribosomal protein l25/general stress protein ctc | CD58_RS23910 | Not Available | Positive | 5582800 - 5583402 | 21269.7 |
| aminoacyl-trna hydrolase | CD58_RS23915 | Not Available | Positive | 5583569 - 5584153 | 20900.2 |
| redox-regulated atpase ychf | CD58_RS23920 | Not Available | Positive | 5584176 - 5585276 | 40005.2 |
| hypothetical protein | CD58_RS30880 | Not Available | Negative | 5585286 - 5585552 | 9651.37 |
| mfs transporter | CD58_RS23925 | Not Available | Positive | 5585579 - 5586787 | 41582.5 |
| calcium-binding protein | CD58_RS23930 | Not Available | Negative | 5586900 - 5588963 | 72020.1 |
| is481 family transposase | CD58_RS23935 | Not Available | Positive | 5589268 - 5590392 | 43205.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
