Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CD58_RS23845 | Not Available | Positive | 5571567 - 5572340 | 27251.0 |
| ykgj family cysteine cluster protein | CD58_RS23850 | Not Available | Positive | 5572369 - 5572674 | 11282.7 |
| acyloxyacyl hydrolase | CD58_RS23855 | Not Available | Negative | 5572804 - 5573322 | 18984.0 |
| glutamate racemase | CD58_RS23860 | Not Available | Negative | 5573437 - 5574228 | 28245.5 |
| molybdopterin-synthase adenylyltransferase moeb | CD58_RS23865 | Not Available | Negative | 5574221 - 5574976 | 26766.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | CD58_RS23870 | Not Available | Negative | 5574970 - 5575800 | 30072.1 |
| peptide chain release factor 1 | CD58_RS23875 | Not Available | Negative | 5575815 - 5576897 | 39984.1 |
| glutamyl-trna reductase | CD58_RS23880 | Not Available | Negative | 5576894 - 5578183 | 46816.2 |
| tetratricopeptide repeat protein | CD58_RS23885 | Not Available | Positive | 5578356 - 5580080 | 64034.5 |
| lipoprotein insertase outer membrane protein lolb | CD58_RS23890 | Not Available | Positive | 5580085 - 5580702 | 23182.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
