Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wbuc family cupin fold metalloprotein | CD58_RS23795 | Not Available | Negative | 5561521 - 5561994 | 17299.7 |
| hypoxanthine-guanine phosphoribosyltransferase | CD58_RS23800 | Not Available | Negative | 5561998 - 5562555 | 20720.8 |
| uracil phosphoribosyltransferase | CD58_RS23805 | Not Available | Positive | 5562732 - 5563370 | 22981.3 |
| uracil-xanthine permease family protein | CD58_RS23810 | Not Available | Positive | 5563373 - 5564647 | 44189.6 |
| ferrochelatase | CD58_RS23815 | Not Available | Negative | 5564791 - 5565816 | 38510.6 |
| tigr01777 family oxidoreductase | CD58_RS23820 | Not Available | Negative | 5565830 - 5566729 | 32885.3 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS23825 | Not Available | Positive | 5566926 - 5567912 | 35737.3 |
| ybga family protein | CD58_RS23830 | Not Available | Positive | 5568084 - 5569046 | 35965.6 |
| merr family transcriptional regulator | CD58_RS23835 | Not Available | Positive | 5569046 - 5569984 | 35159.7 |
| deoxyribodipyrimidine photo-lyase | CD58_RS23840 | Not Available | Positive | 5569997 - 5571457 | 55178.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
