Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpxcg motif-containing cysteine-rich protein | CD58_RS29550 | Not Available | Negative | 5551972 - 5552154 | 6883.96 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CD58_RS23750 | Not Available | Positive | 5552294 - 5553460 | 43807.3 |
| hypothetical protein | CD58_RS23755 | Not Available | Negative | 5553607 - 5553888 | 10639.2 |
| hypothetical protein | CD58_RS29555 | Not Available | Positive | 5554120 - 5554326 | 7636.94 |
| yajg family lipoprotein | CD58_RS23765 | Not Available | Negative | 5555252 - 5555836 | 20761.1 |
| hypothetical protein | CD58_RS23770 | Not Available | Positive | 5556042 - 5556275 | 9046.12 |
| malate dehydrogenase (quinone) | CD58_RS23775 | Not Available | Positive | 5557013 - 5558521 | 54507.6 |
| pa4642 family protein | CD58_RS23780 | Not Available | Negative | 5558642 - 5558929 | 11054.0 |
| hypothetical protein | CD58_RS23785 | Not Available | Negative | 5558991 - 5559476 | 18124.0 |
| c4-dicarboxylic acid transporter daua | CD58_RS23790 | Not Available | Positive | 5559791 - 5561512 | 61178.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
