Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1302 domain-containing protein | CD58_RS23695 | Not Available | Negative | 5539666 - 5541561 | 68205.3 |
| fatty acid--coa ligase | CD58_RS23700 | Not Available | Negative | 5541896 - 5543578 | 62294.2 |
| lyse family translocator | CD58_RS23705 | Not Available | Negative | 5543723 - 5544352 | 22538.9 |
| 2-hydroxyacid dehydrogenase | CD58_RS23710 | Not Available | Positive | 5544650 - 5545615 | 34251.3 |
| class i sam-dependent methyltransferase | CD58_RS23715 | Not Available | Positive | 5545649 - 5546647 | 35845.1 |
| tmem165/gdt1 family protein | CD58_RS23720 | Not Available | Positive | 5546910 - 5547494 | 20541.5 |
| m48 family metallopeptidase | CD58_RS23725 | Not Available | Negative | 5547626 - 5548441 | 28932.7 |
| methyl-accepting chemotaxis protein | CD58_RS23730 | Not Available | Positive | 5548659 - 5550797 | 76638.7 |
| sos response-associated peptidase | CD58_RS23735 | Not Available | Negative | 5551041 - 5551664 | 23386.0 |
| putative signal transducing protein | CD58_RS23740 | Not Available | Negative | 5551700 - 5551960 | 9155.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
