Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp(h)-dependent aldo-keto reductase | CD58_RS23645 | Not Available | Positive | 5527015 - 5528055 | 38707.7 |
| acyl-coa dehydrogenase family protein | CD58_RS23650 | Not Available | Negative | 5528172 - 5529308 | 41748.3 |
| glxa family transcriptional regulator | CD58_RS23655 | Not Available | Positive | 5529551 - 5530447 | 34050.4 |
| cell division protein zape | CD58_RS23660 | Not Available | Negative | 5530631 - 5531725 | 41955.3 |
| tryptophan--trna ligase | CD58_RS23665 | Not Available | Negative | 5531827 - 5533182 | 49718.0 |
| alpha/beta hydrolase | CD58_RS23670 | Not Available | Negative | 5533207 - 5533836 | 22737.4 |
| yhcb family protein | CD58_RS23675 | Not Available | Positive | 5533985 - 5534419 | 16104.1 |
| metal abc transporter atp-binding protein | CD58_RS23680 | Not Available | Negative | 5534495 - 5534994 | 17427.8 |
| luxr c-terminal-related transcriptional regulator | CD58_RS23685 | Not Available | Negative | 5535200 - 5537938 | 102158.0 |
| duf1329 domain-containing protein | CD58_RS23690 | Not Available | Negative | 5538276 - 5539640 | 50767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
