Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | CD58_RS23595 | Not Available | Positive | 5519294 - 5519656 | 13783.2 |
| phosphoheptose isomerase | CD58_RS23600 | Not Available | Positive | 5519759 - 5520352 | 21264.4 |
| metal abc transporter atp-binding protein | CD58_RS23605 | Not Available | Positive | 5520349 - 5520926 | 20980.8 |
| clpxp protease specificity-enhancing factor | CD58_RS23610 | Not Available | Negative | 5521893 - 5522306 | 15077.7 |
| glutathione s-transferase n-terminal domain-containing protein | CD58_RS23615 | Not Available | Negative | 5522323 - 5522940 | 23462.6 |
| cytochrome c1 | CD58_RS23620 | Not Available | Negative | 5523092 - 5523874 | 29144.3 |
| cytochrome b | CD58_RS23625 | Not Available | Negative | 5523874 - 5525085 | 45944.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | CD58_RS23630 | Not Available | Negative | 5525085 - 5525678 | 20992.2 |
| 30s ribosomal protein s9 | CD58_RS23635 | Not Available | Negative | 5525934 - 5526326 | 14589.6 |
| 50s ribosomal protein l13 | CD58_RS23640 | Not Available | Negative | 5526341 - 5526769 | 15855.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
