Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-amp cyclohydrolase | CD58_RS01875 | Not Available | Negative | 436428 - 436826 | 15243.1 |
| ubiquinone biosynthesis regulatory protein kinase ubib | CD58_RS01880 | Not Available | Negative | 436959 - 438563 | 61502.3 |
| scp2 domain-containing protein | CD58_RS01885 | Not Available | Negative | 438567 - 439184 | 22747.3 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CD58_RS01890 | Not Available | Negative | 439184 - 439954 | 28375.3 |
| polyhydroxyalkanoic acid system family protein | CD58_RS01895 | Not Available | Positive | 440110 - 440385 | 9840.95 |
| phasin family protein | CD58_RS01900 | Not Available | Positive | 440651 - 441073 | 15429.6 |
| phasin family protein | CD58_RS01905 | Not Available | Positive | 441084 - 441995 | 30258.6 |
| metal abc transporter atp-binding protein | CD58_RS31630 | Not Available | Negative | 442079 - 442168 | 2998.51 |
| tetr/acrr family transcriptional regulator | CD58_RS01910 | Not Available | Negative | 442175 - 442795 | 23495.9 |
| class ii poly(r)-hydroxyalkanoic acid synthase | CD58_RS01915 | Not Available | Negative | 442856 - 444538 | 62570.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
