Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CD58_RS23550 | Not Available | Negative | 5508320 - 5509402 | 39291.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CD58_RS23555 | Not Available | Negative | 5509402 - 5510769 | 47183.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CD58_RS23560 | Not Available | Negative | 5510762 - 5512225 | 51790.1 |
| peptidoglycan d,d-transpeptidase ftsi family protein | CD58_RS23565 | Not Available | Negative | 5512225 - 5513964 | 63028.4 |
| cell division protein ftsl | CD58_RS23570 | Not Available | Negative | 5513964 - 5514257 | 10874.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CD58_RS23575 | Not Available | Negative | 5514254 - 5515195 | 34100.9 |
| division/cell wall cluster transcriptional repressor mraz | CD58_RS23580 | Not Available | Negative | 5515198 - 5515653 | 17033.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 5515963 - 5516316 | Not Available |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CD58_RS23585 | Not Available | Negative | 5516391 - 5517296 | 32548.3 |
| penicillin-binding protein activator | CD58_RS23590 | Not Available | Positive | 5517483 - 5519294 | 65345.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
