Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | CD58_RS23500 | Not Available | Positive | 5496074 - 5497567 | 54883.6 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | CD58_RS23505 | Not Available | Negative | 5497815 - 5498726 | 33310.7 |
| cell division protein ftsz | CD58_RS23510 | Not Available | Negative | 5498839 - 5500032 | 41668.3 |
| cell division protein ftsa | CD58_RS23515 | Not Available | Negative | 5500134 - 5501393 | 44820.0 |
| cell division protein ftsq/divib | CD58_RS23520 | Not Available | Negative | 5501409 - 5502275 | 32231.1 |
| d-alanine--d-alanine ligase | CD58_RS23525 | Not Available | Negative | 5502279 - 5503244 | 34209.9 |
| udp-n-acetylmuramate--l-alanine ligase | CD58_RS23530 | Not Available | Negative | 5503241 - 5504701 | 52634.6 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CD58_RS23535 | Not Available | Negative | 5504694 - 5505764 | 37847.2 |
| putative lipid ii flippase ftsw | CD58_RS23540 | Not Available | Negative | 5505754 - 5506965 | 44132.2 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CD58_RS23545 | Not Available | Negative | 5506968 - 5508314 | 47905.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
