Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | CD58_RS23450 | Not Available | Negative | 5482891 - 5483754 | 32278.7 |
| duf1656 domain-containing protein | CD58_RS23455 | Not Available | Negative | 5483765 - 5483965 | 7704.74 |
| fusc family protein | CD58_RS23460 | Not Available | Negative | 5483955 - 5486159 | 81306.1 |
| efflux transporter outer membrane subunit | CD58_RS23465 | Not Available | Negative | 5486169 - 5487680 | 54000.0 |
| lysr family transcriptional regulator | CD58_RS23470 | Not Available | Positive | 5488005 - 5488973 | 35092.1 |
| hypothetical protein | CD58_RS23475 | Not Available | Negative | 5489002 - 5489259 | 8903.37 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS23480 | Not Available | Positive | 5489497 - 5490654 | 41512.4 |
| multidrug efflux rnd transporter permease subunit | CD58_RS23485 | Not Available | Positive | 5490651 - 5493764 | 110531.0 |
| heavy metal response regulator transcription factor | CD58_RS23490 | Not Available | Positive | 5493774 - 5494457 | 25393.8 |
| heavy metal sensor histidine kinase | CD58_RS23495 | Not Available | Positive | 5494444 - 5495811 | 50230.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
