Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | CD58_RS23305 | Not Available | Negative | 5446390 - 5447571 | 43227.6 |
| amino acid abc transporter substrate-binding protein | CD58_RS23310 | Not Available | Negative | 5447637 - 5448668 | 36592.6 |
| alpha/beta hydrolase | CD58_RS23315 | Not Available | Positive | 5449142 - 5449798 | 24006.7 |
| atp-dependent rna helicase rhlb | CD58_RS23320 | Not Available | Positive | 5449898 - 5451361 | 54114.4 |
| ornithine cyclodeaminase family protein | CD58_RS23325 | Not Available | Positive | 5451489 - 5452442 | 34329.4 |
| metal abc transporter atp-binding protein | CD58_RS23330 | Not Available | Positive | 5452591 - 5453717 | 39161.2 |
| transcriptional regulator | CD58_RS23335 | Not Available | Positive | 5453806 - 5454432 | 23498.0 |
| abc transporter substrate-binding protein | CD58_RS23340 | Not Available | Negative | 5454487 - 5455263 | 28392.0 |
| molybdopterin synthase catalytic subunit moae | CD58_RS23345 | Not Available | Negative | 5455517 - 5455969 | 16439.6 |
| moad/this family protein | CD58_RS23350 | Not Available | Negative | 5455973 - 5456215 | 8930.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
