Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein yejk | CD58_RS23255 | Not Available | Positive | 5438363 - 5439367 | 37409.0 |
| glutaredoxin family protein | CD58_RS23260 | Not Available | Positive | 5439367 - 5439723 | 13454.5 |
| glutathione s-transferase family protein | CD58_RS23265 | Not Available | Negative | 5439836 - 5440771 | 34111.9 |
| giy-yig nuclease family protein | CD58_RS23270 | Not Available | Negative | 5440851 - 5441174 | 11823.2 |
| nuclear transport factor 2 family protein | CD58_RS23275 | Not Available | Negative | 5441214 - 5441684 | 17778.9 |
| cynx/nimt family mfs transporter | CD58_RS23280 | Not Available | Negative | 5441773 - 5443077 | 45293.6 |
| fadr/gntr family transcriptional regulator | CD58_RS23285 | Not Available | Negative | 5443091 - 5443750 | 24715.6 |
| type ii toxin-antitoxin system mqsa family antitoxin | CD58_RS23290 | Not Available | Positive | 5443967 - 5444446 | 17968.6 |
| amino acid abc transporter atp-binding protein | CD58_RS23295 | Not Available | Negative | 5444506 - 5445270 | 28866.4 |
| amino acid abc transporter permease | CD58_RS23300 | Not Available | Negative | 5445282 - 5446379 | 40628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
