Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | CD58_RS23205 | Not Available | Negative | 5425314 - 5426168 | 31933.0 |
| translation elongation factor 4 | CD58_RS23210 | Not Available | Negative | 5426174 - 5427973 | 66361.1 |
| lps export abc transporter permease lptg | CD58_RS23215 | Not Available | Negative | 5428230 - 5429291 | 38569.4 |
| lps export abc transporter permease lptf | CD58_RS23220 | Not Available | Negative | 5429284 - 5430405 | 41511.3 |
| leucyl aminopeptidase | CD58_RS23225 | Not Available | Positive | 5430720 - 5432210 | 52610.8 |
| dna polymerase iii subunit chi | CD58_RS23230 | Not Available | Positive | 5432271 - 5432699 | 16226.3 |
| hypothetical protein | CD58_RS23235 | Not Available | Positive | 5432707 - 5433072 | 13792.5 |
| valine--trna ligase | CD58_RS23240 | Not Available | Positive | 5433307 - 5436153 | 107161.0 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | CD58_RS23245 | Not Available | Positive | 5436409 - 5437434 | 37929.5 |
| hu family dna-binding protein | CD58_RS23250 | Not Available | Negative | 5437685 - 5437966 | 9671.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
