Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | CD58_RS23155 | Not Available | Positive | 5410030 - 5411052 | 36365.6 |
| phosphoenolpyruvate--protein phosphotransferase | CD58_RS23160 | Not Available | Positive | 5411095 - 5413608 | 88949.2 |
| n-acetylglucosamine-specific pts transporter subunit iibc | CD58_RS23165 | Not Available | Positive | 5413642 - 5415357 | 60729.2 |
| yqfo family protein | CD58_RS23170 | Not Available | Negative | 5415689 - 5416000 | 11556.7 |
| phosphoribosylformylglycinamidine synthase | CD58_RS23175 | Not Available | Negative | 5416005 - 5419901 | 140526.0 |
| membrane-bound lytic murein transglycosylase mltf | CD58_RS23180 | Not Available | Positive | 5420190 - 5421650 | 54697.1 |
| pyridoxine 5'-phosphate synthase | CD58_RS23185 | Not Available | Negative | 5421860 - 5422603 | 26646.9 |
| dna repair protein reco | CD58_RS23190 | Not Available | Negative | 5422653 - 5423342 | 25079.3 |
| gtpase era | CD58_RS23195 | Not Available | Negative | 5423546 - 5424448 | 33999.3 |
| ribonuclease iii | CD58_RS23200 | Not Available | Negative | 5424441 - 5425130 | 25465.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
