Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | CD58_RS23105 | Not Available | Negative | 5402088 - 5402297 | 7870.49 |
| gamma carbonic anhydrase family protein | CD58_RS23110 | Not Available | Negative | 5402294 - 5402818 | 18787.6 |
| coa pyrophosphatase | CD58_RS23115 | Not Available | Negative | 5402835 - 5403434 | 22353.7 |
| nudix hydrolase | CD58_RS23120 | Not Available | Positive | 5403580 - 5404131 | 20725.4 |
| murein l,d-transpeptidase family protein | CD58_RS23125 | Not Available | Positive | 5404172 - 5404678 | 19114.1 |
| hypothetical protein | CD58_RS23130 | Not Available | Positive | 5405037 - 5406122 | 39526.4 |
| duf6124 family protein | CD58_RS23135 | Not Available | Negative | 5406384 - 5406737 | 12688.0 |
| hypothetical protein | CD58_RS23140 | Not Available | Negative | 5406985 - 5407437 | 16952.3 |
| metal abc transporter atp-binding protein | CD58_RS23145 | Not Available | Positive | 5408195 - 5408925 | 26615.2 |
| n-acetylglucosamine-6-phosphate deacetylase | CD58_RS23150 | Not Available | Positive | 5408943 - 5410049 | 38938.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
