Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS23055 | Not Available | Negative | 5389569 - 5390837 | 45766.4 |
| cs1-pili formation c-terminal domain-containing protein | CD58_RS23060 | Not Available | Negative | 5390932 - 5393466 | 92394.8 |
| cs1 type fimbrial major subunit | CD58_RS23065 | Not Available | Negative | 5393593 - 5394078 | 17061.0 |
| padr family transcriptional regulator | CD58_RS23070 | Not Available | Positive | 5394505 - 5395068 | 20872.0 |
| siderophore-interacting protein | CD58_RS23075 | Not Available | Positive | 5395065 - 5395850 | 29134.7 |
| preq0 transporter | CD58_RS23080 | Not Available | Positive | 5396088 - 5396555 | 16942.2 |
| formate-dependent phosphoribosylglycinamide formyltransferase | CD58_RS23085 | Not Available | Positive | 5396658 - 5397839 | 42265.8 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | CD58_RS23090 | Not Available | Negative | 5398094 - 5400508 | 86300.6 |
| vf530 family dna-binding protein | CD58_RS23095 | Not Available | Positive | 5401039 - 5401269 | 8994.91 |
| pr6pr family membrane protein | CD58_RS23100 | Not Available | Positive | 5401273 - 5401932 | 24495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
