Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosyltransferase domain-containing protein | CD58_RS23005 | Not Available | Negative | 5377155 - 5378678 | 57691.9 |
| glycosyltransferase family 2 protein | CD58_RS23010 | Not Available | Negative | 5378675 - 5379625 | 35607.4 |
| gtra family protein | CD58_RS23015 | Not Available | Negative | 5379622 - 5379996 | 14051.4 |
| amino acid permease | CD58_RS23020 | Not Available | Negative | 5380161 - 5381582 | 50952.7 |
| rep-associated tyrosine transposase | CD58_RS23025 | Not Available | Negative | 5382207 - 5382665 | 17445.9 |
| transglycosylase domain-containing protein | CD58_RS23030 | Not Available | Positive | 5383053 - 5386160 | 115187.0 |
| cs1 type fimbrial major subunit | CD58_RS23035 | Not Available | Negative | 5386188 - 5386682 | 18172.3 |
| cs1 type fimbrial major subunit | CD58_RS23040 | Not Available | Negative | 5386905 - 5387387 | 17791.4 |
| pilus assembly protein | CD58_RS23045 | Not Available | Negative | 5387432 - 5388175 | 27594.9 |
| hypothetical protein | CD58_RS23050 | Not Available | Negative | 5388268 - 5389503 | 44551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
