Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CD58_RS22955 | Not Available | Negative | 5363435 - 5363932 | 18862.9 |
| lyse family translocator | CD58_RS22960 | Not Available | Negative | 5363929 - 5364567 | 22989.8 |
| nudix hydrolase | CD58_RS22965 | Not Available | Negative | 5364585 - 5365001 | 14712.8 |
| hd domain-containing phosphohydrolase | CD58_RS22970 | Not Available | Negative | 5365294 - 5366661 | 51623.3 |
| eal domain-containing protein | CD58_RS22975 | Not Available | Positive | 5366890 - 5369181 | 85545.3 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS22980 | Not Available | Positive | 5369178 - 5371052 | 70442.3 |
| cytochrome-c peroxidase | CD58_RS22985 | Not Available | Positive | 5371093 - 5372052 | 35359.0 |
| dahl domain-containing protein | CD58_RS22990 | Not Available | Positive | 5372049 - 5373851 | 66953.1 |
| atp-binding protein | CD58_RS22995 | Not Available | Positive | 5373848 - 5375254 | 52063.3 |
| fmn-binding glutamate synthase family protein | CD58_RS23000 | Not Available | Positive | 5375519 - 5377138 | 59072.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
