Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | CD58_RS22755 | Not Available | Negative | 5296102 - 5296950 | 32310.7 |
| histone-like nucleoid-structuring protein mvat | CD58_RS22760 | Not Available | Positive | 5297254 - 5297631 | 14067.9 |
| exodeoxyribonuclease i | CD58_RS22765 | Not Available | Negative | 5297728 - 5299155 | 54844.2 |
| rdd family protein | CD58_RS22770 | Not Available | Positive | 5299488 - 5300213 | 26282.6 |
| stage ii sporulation protein m | CD58_RS22775 | Not Available | Positive | 5300210 - 5301184 | 35383.1 |
| duf4129 domain-containing protein | CD58_RS22780 | Not Available | Positive | 5301171 - 5302709 | 58996.1 |
| duf4350 domain-containing protein | CD58_RS22785 | Not Available | Positive | 5302706 - 5303869 | 43891.7 |
| aaa family atpase | CD58_RS22790 | Not Available | Positive | 5303866 - 5304870 | 36666.5 |
| duf58 domain-containing protein | CD58_RS22795 | Not Available | Positive | 5305046 - 5306377 | 50181.8 |
| ig-like domain-containing protein | CD58_RS22800 | Not Available | Negative | 5306418 - 5311115 | 169976.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
