Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | CD58_RS22710 | Not Available | Negative | 5283245 - 5283877 | 23309.0 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | CD58_RS22715 | Not Available | Negative | 5284046 - 5285263 | 42307.8 |
| preprotein translocase subunit seca | CD58_RS22720 | Not Available | Negative | 5285384 - 5288119 | 102705.0 |
| duf721 domain-containing protein | CD58_RS22725 | Not Available | Positive | 5288427 - 5288882 | 16774.4 |
| is256 family transposase | CD58_RS22730 | Not Available | Positive | 5289782 - 5291032 | 46841.4 |
| helicase hera-like domain-containing protein | CD58_RS22735 | Not Available | Negative | 5291174 - 5292670 | 53178.3 |
| glycosyltransferase family 4 protein | CD58_RS22740 | Not Available | Positive | 5292969 - 5294090 | 40916.7 |
| duf2334 domain-containing protein | CD58_RS22745 | Not Available | Positive | 5294107 - 5294874 | 29593.3 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | CD58_RS22750 | Not Available | Positive | 5294871 - 5295866 | 36357.4 |
| hypothetical protein | CD58_RS31300 | Not Available | Negative | 5295871 - 5296044 | 6282.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
