Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slyx family protein | CD58_RS22665 | Not Available | Negative | 5273991 - 5274197 | 7931.38 |
| hit domain-containing protein | CD58_RS22670 | Not Available | Negative | 5274201 - 5274626 | 16146.2 |
| hypothetical protein | CD58_RS30790 | Not Available | Positive | 5275156 - 5275416 | 9666.82 |
| oprd family porin | CD58_RS22675 | Not Available | Positive | 5275523 - 5276797 | 46569.9 |
| mechanosensitive ion channel family protein | CD58_RS22680 | Not Available | Negative | 5276945 - 5277787 | 30337.3 |
| yajq family cyclic di-gmp-binding protein | CD58_RS22685 | Not Available | Negative | 5277948 - 5278427 | 17947.8 |
| putative 2-dehydropantoate 2-reductase | CD58_RS22690 | Not Available | Positive | 5278570 - 5279487 | 32853.3 |
| atp-binding protein | CD58_RS22695 | Not Available | Positive | 5279534 - 5281570 | 75638.2 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CD58_RS22700 | Not Available | Positive | 5281573 - 5282154 | 20713.9 |
| nudix family hydrolase | CD58_RS22705 | Not Available | Negative | 5282304 - 5283248 | 33958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
